human genome u133a microarray platform Search Results


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Information of the microarray datasets.
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Description of cohorts in 11 MDD microarray platforms.
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Description of cohorts in 11 MDD microarray platforms.
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The experimental design is described in , except that a concentration of 75 µM Zn was used. After 6 h E 2 or Zn treatment, cells were harvested and transcript profiling undertaken using Affymetrix Human Genome <t>U133</t> Plus 2.0 oligonucleotide microarrays. After normalisation and correction for multiple hypothesis testing, probesets that were significantly regulated in the same direction by estrogen or c-Myc (but not by c-Zip) were identified (adjusted P <0.01). (A) The number of up-regulated (filled) or down-regulated (hatched) genes classified as ‘E 2 and Myc’ (red) or ‘E 2 not Myc’ (blue) is shown. (B, C) The fold change in the expression of significantly-regulated probesets following estrogen treatment (relative to vehicle (EtOH) treatment) is shown compared with that following zinc induction of c-Myc (relative to zinc treatment of empty vector cells) as the average of three independent experiments. Red: ‘E 2 and Myc’; Blue: ‘E 2 not Myc’. (D) The overlap between probesets in the indicated categories and publically available databases of estrogen-regulated genes (open bars) and c-Myc-regulated genes (filled bars) is shown.
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affymetrix hg u133a oligonucleotide microarray  (Thermo Fisher)
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The experimental design is described in , except that a concentration of 75 µM Zn was used. After 6 h E 2 or Zn treatment, cells were harvested and transcript profiling undertaken using Affymetrix Human Genome <t>U133</t> Plus 2.0 oligonucleotide microarrays. After normalisation and correction for multiple hypothesis testing, probesets that were significantly regulated in the same direction by estrogen or c-Myc (but not by c-Zip) were identified (adjusted P <0.01). (A) The number of up-regulated (filled) or down-regulated (hatched) genes classified as ‘E 2 and Myc’ (red) or ‘E 2 not Myc’ (blue) is shown. (B, C) The fold change in the expression of significantly-regulated probesets following estrogen treatment (relative to vehicle (EtOH) treatment) is shown compared with that following zinc induction of c-Myc (relative to zinc treatment of empty vector cells) as the average of three independent experiments. Red: ‘E 2 and Myc’; Blue: ‘E 2 not Myc’. (D) The overlap between probesets in the indicated categories and publically available databases of estrogen-regulated genes (open bars) and c-Myc-regulated genes (filled bars) is shown.
Affymetrix Hg U133a Oligonucleotide Microarray, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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gse38713 colon gpl570 affymetrix human genome u133 plus 2 0 array  (Thermo Fisher)
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The experimental design is described in , except that a concentration of 75 µM Zn was used. After 6 h E 2 or Zn treatment, cells were harvested and transcript profiling undertaken using Affymetrix Human Genome <t>U133</t> Plus 2.0 oligonucleotide microarrays. After normalisation and correction for multiple hypothesis testing, probesets that were significantly regulated in the same direction by estrogen or c-Myc (but not by c-Zip) were identified (adjusted P <0.01). (A) The number of up-regulated (filled) or down-regulated (hatched) genes classified as ‘E 2 and Myc’ (red) or ‘E 2 not Myc’ (blue) is shown. (B, C) The fold change in the expression of significantly-regulated probesets following estrogen treatment (relative to vehicle (EtOH) treatment) is shown compared with that following zinc induction of c-Myc (relative to zinc treatment of empty vector cells) as the average of three independent experiments. Red: ‘E 2 and Myc’; Blue: ‘E 2 not Myc’. (D) The overlap between probesets in the indicated categories and publically available databases of estrogen-regulated genes (open bars) and c-Myc-regulated genes (filled bars) is shown.
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Image Search Results


Information of the microarray datasets.

Journal: Frontiers in Genetics

Article Title: Identification of apoptosis-immune-related gene signature and construction of diagnostic model for sepsis based on single-cell sequencing and bulk transcriptome analysis

doi: 10.3389/fgene.2024.1389630

Figure Lengend Snippet: Information of the microarray datasets.

Article Snippet: GSE13904 , GPL570 (HG-U133_Plus_2) Affymetrix Human Genome U133 Plus 2.0 Array , 227 , 18 , 158.

Techniques: Microarray, Control

Description of cohorts in 11 MDD microarray platforms.

Journal: PLoS ONE

Article Title: A Conserved BDNF, Glutamate- and GABA-Enriched Gene Module Related to Human Depression Identified by Coexpression Meta-Analysis and DNA Variant Genome-Wide Association Studies

doi: 10.1371/journal.pone.0090980

Figure Lengend Snippet: Description of cohorts in 11 MDD microarray platforms.

Article Snippet: 1 , ACC , MD1_ACC , Affymetrix Human Genome U133 Plus 2.0 , 40,610 , 19,466 , 32.

Techniques: Microarray

The experimental design is described in , except that a concentration of 75 µM Zn was used. After 6 h E 2 or Zn treatment, cells were harvested and transcript profiling undertaken using Affymetrix Human Genome U133 Plus 2.0 oligonucleotide microarrays. After normalisation and correction for multiple hypothesis testing, probesets that were significantly regulated in the same direction by estrogen or c-Myc (but not by c-Zip) were identified (adjusted P <0.01). (A) The number of up-regulated (filled) or down-regulated (hatched) genes classified as ‘E 2 and Myc’ (red) or ‘E 2 not Myc’ (blue) is shown. (B, C) The fold change in the expression of significantly-regulated probesets following estrogen treatment (relative to vehicle (EtOH) treatment) is shown compared with that following zinc induction of c-Myc (relative to zinc treatment of empty vector cells) as the average of three independent experiments. Red: ‘E 2 and Myc’; Blue: ‘E 2 not Myc’. (D) The overlap between probesets in the indicated categories and publically available databases of estrogen-regulated genes (open bars) and c-Myc-regulated genes (filled bars) is shown.

Journal: PLoS ONE

Article Title: Identification of Functional Networks of Estrogen- and c-Myc-Responsive Genes and Their Relationship to Response to Tamoxifen Therapy in Breast Cancer

doi: 10.1371/journal.pone.0002987

Figure Lengend Snippet: The experimental design is described in , except that a concentration of 75 µM Zn was used. After 6 h E 2 or Zn treatment, cells were harvested and transcript profiling undertaken using Affymetrix Human Genome U133 Plus 2.0 oligonucleotide microarrays. After normalisation and correction for multiple hypothesis testing, probesets that were significantly regulated in the same direction by estrogen or c-Myc (but not by c-Zip) were identified (adjusted P <0.01). (A) The number of up-regulated (filled) or down-regulated (hatched) genes classified as ‘E 2 and Myc’ (red) or ‘E 2 not Myc’ (blue) is shown. (B, C) The fold change in the expression of significantly-regulated probesets following estrogen treatment (relative to vehicle (EtOH) treatment) is shown compared with that following zinc induction of c-Myc (relative to zinc treatment of empty vector cells) as the average of three independent experiments. Red: ‘E 2 and Myc’; Blue: ‘E 2 not Myc’. (D) The overlap between probesets in the indicated categories and publically available databases of estrogen-regulated genes (open bars) and c-Myc-regulated genes (filled bars) is shown.

Article Snippet: Target probes were prepared and hybridised to Affymetrix Human Genome U133 Plus 2.0 oligonucleotide microarrays (Millennium Science, Box Hill, Vic, Australia) according to the manufacturer's instructions.

Techniques: Concentration Assay, Expressing, Plasmid Preparation